The OMA collection

The OMA collection

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1-7 of 7 ARTICLES
https://doi.org/10.12688/f1000research.135250.2
Software Tool Article metrics
Revised
DrosOMA: the Drosophila Orthologous Matrix browser
[version 2; peer review: 4 approved]
Peer Reviewers Berend Snel; Daofeng Li; Jung-Wan Mok; Elise Parey
  • Funder
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
LATEST VERSION PUBLISHED 16 Jan 2024
https://doi.org/10.12688/f1000research.128656.1
Method Article metrics
Phylogenetic placement of whole genome duplications in yeasts through quantitative analysis of hierarchical orthologous groups
[version 1; peer review: 1 approved with reservations, 1 not approved]
Peer Reviewers Xinyi Guo; Gavin Conant
  • Funder
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
PUBLISHED 12 Apr 2023
https://doi.org/10.12688/f1000research.23790.2
Method Article metrics
Revised
How to build phylogenetic species trees with OMA
[version 2; peer review: 2 approved]
Peer Reviewers Jianbo Xie; Denis Baurain
  • Funders
  • Swiss National Science Foundation
  • Swiss Institute of Bioinformatics
LATEST VERSION PUBLISHED 28 Feb 2022
https://doi.org/10.12688/f1000research.21027.2
Method Article metrics
Revised
A hands-on introduction to querying evolutionary relationships across multiple data sources using SPARQL
[version 2; peer review: 3 approved]
Peer Reviewers Andra Waagmeester; Ikuo Uchiyama; Tatsuya Kushida
  • Funders
  • Swiss National Research Programme 75 “Big Data”
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
LATEST VERSION PUBLISHED 22 Jul 2020
https://doi.org/10.12688/f1000research.24904.1
Editorial metrics NOT PEER REVIEWED
Making the most of genomic data with OMA
[version 1; peer review: not peer reviewed]
  • Funder
  • Swiss Institute of Bioinformatics
PUBLISHED 01 Jul 2020
https://doi.org/10.12688/f1000research.21508.1
Software Tool Article metrics
Identifying orthologs with OMA: A primer
[version 1; peer review: 2 approved]
Peer Reviewers Stephanie J. Spielman; Paula Ramos-Silva
  • Funders
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
  • Swiss Institute of Bioinformatics
PUBLISHED 17 Jan 2020
https://doi.org/10.12688/f1000research.17548.2
Software Tool Article metrics
Revised
Expanding the Orthologous Matrix (OMA) programmatic interfaces: REST API and the OmaDB packages for R and Python
[version 2; peer review: 2 approved]
Peer Reviewers Bastian Greshake Tzovaras and Ngoc-Vinh Tran; Laurent Gatto
  • Funders
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
  • University College London
  • Swiss State Secretariat for Education
  • Biotechnology and Biological Sciences Research Council
LATEST VERSION PUBLISHED 29 Mar 2019
1-7 of 7 ARTICLES
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