BioJS

BioJS

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1-16 of 16 ARTICLES
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Featured Article
https://doi.org/10.12688/f1000research.3-56.v1
Editorial metrics NOT PEER REVIEWED
The BioJS article collection of open source components for biological data visualisation
[version 1; peer review: not peer reviewed]
Manuel Corpas
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.16605.1
Software Tool Article metrics
KnetMaps: a BioJS component to visualize biological knowledge networks
[version 1; peer review: 3 approved, 1 approved with reservations]
Ajit Singh, Christopher J. Rawlings, Keywan Hassani-Pak
Peer Reviewers Ian Dunham and Gareth Peat; Chia-Yi Cheng; Nicholas J. Provart; Ramil Mauleon
  • Funder
  • Biotechnology and Biological Sciences Research Council
PUBLISHED 17 Oct 2018
https://doi.org/10.12688/f1000research.9618.2
Software Tool Article metrics
Revised
biojs-io-biom, a BioJS component for handling data in Biological Observation Matrix (BIOM) format
[version 2; peer review: 2 approved, 1 approved with reservations]
Markus J. Ankenbrand, Niklas Terhoeven, Sonja Hohlfeld, Frank Förster, Alexander Keller
Peer Reviewers Daniel McDonald and Evan Bolyen; Holly M. Bik; Joseph Nathaniel Paulson
LATEST VERSION PUBLISHED 09 Jan 2017
https://doi.org/10.12688/f1000research.3-53.v3
Software Tool Article metrics
Revised
wigExplorer, a BioJS component to visualise wig data
[version 3; peer review: 1 approved, 2 approved with reservations, 1 not approved]
Anil S. Thanki, Rafael C. Jimenez, Gemy G. Kaithakottil, Manuel Corpas, Robert P. Davey
Peer Reviewers Robert Buels; Phil Lord; Stefan Thomas Lang; Chunlei Wu and Jiwen Xin
LATEST VERSION PUBLISHED 09 Aug 2016
https://doi.org/10.12688/f1000research.3-47.v2
Software Tool Article metrics
Revised
FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences
[version 2; peer review: 2 approved]
Leyla Garcia, Guy Yachdav, Maria-Jesus Martin
Peer Reviewers Jim Procter; Andreas Prlic
LATEST VERSION PUBLISHED 09 Apr 2014
https://doi.org/10.12688/f1000research.3-55.v1
Commentary metrics
BioJS: an open source standard for biological visualisation – its status in 2014
[version 1; peer review: 2 approved]
Manuel Corpas, Rafael Jimenez, Seth J Carbon, Alex García, Leyla Garcia, Tatyana Goldberg, John Gomez, Alexis Kalderimis, Suzanna E Lewis, Ian Mulvany, Aleksandra Pawlik, Francis Rowland, Gustavo Salazar, Fabian Schreiber, Ian Sillitoe, William H Spooner, Anil S. Thanki, José M Villaveces, Guy Yachdav, Henning Hermjakob
Peer Reviewers Philip E. Bourne; Reinhard Schneider
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-54.v1
Software Tool Article metrics
DNAContentViewer a BioJS component to visualise GC/AT Content
[version 1; peer review: 2 approved with reservations]
Anil S. Thanki, Shabhonam Caim, Manuel Corpas, Robert P. Davey
Peer Reviewers Dan Schwartz and Joseph O'Shea; Matúš Kalaš
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-52.v1
Web Tool metrics
Sequence, a BioJS component for visualising sequences
[version 1; peer review: 2 approved]
John Gomez, Rafael Jimenez
Peer Reviewers Christoph Gille; Jeremy Goecks
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-51.v1
Web Tool metrics
BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs
[version 1; peer review: 2 approved]
Alexis Kalderimis, Radek Stepan, Julie Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
Peer Reviewers Tom C. Freeman and Derek Wright; Lynn Fink
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-50.v1
Software Tool Article metrics
PPI layouts: BioJS components for the display of Protein-Protein Interactions
[version 1; peer review: 2 approved]
Gustavo A. Salazar, Ayton Meintjes, Nicola Mulder
Peer Reviewers Laurent Gatto; Hagen Blankenburg
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-49.v1
Web Tool metrics
treeWidget: a BioJS component to visualise phylogenetic trees
[version 1; peer review: 1 approved, 1 approved with reservations]
Fabian Schreiber
Peer Reviewers Jaime Huerta-Cepas; Stephen A. Smith
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-48.v1
Web Tool metrics
HeatMapViewer: interactive display of 2D data in biology
[version 1; peer review: 2 approved]
Guy Yachdav, Maximilian Hecht, Metsada Pasmanik-Chor, Adva Yeheskel, Burkhard Rost
Peer Reviewers Jordi Deu-Pons; Jon C. Ison
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-46.v1
Web Tool metrics
BioJS InterMineTable Component: A BioJS component for displaying data from InterMine compatible webservice endpoints
[version 1; peer review: 1 approved]
Alexis Kalderimis, Radek Stepan, Julie Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
Peer Reviewers Arnaud Ceol
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-45.v1
Web Tool metrics
BioJS InterMine List Analysis: A BioJS component for displaying graphical or statistical analysis of collections of items from InterMine endpoints
[version 1; peer review: 1 approved]
Alexis Kalderimis, Radek Stepan, Julie Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
Peer Reviewers Clemens Wrzodek
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-44.v1
Software Tool Article metrics
PsicquicGraph, a BioJS component to visualize molecular interactions from PSICQUIC servers
[version 1; peer review: 2 approved]
Jose M. Villaveces, Rafael C. Jimenez, Bianca H. Habermann
Peer Reviewers Christine Orengo; Frederic de Lamotte and Jean-François Dufayard
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-43.v1
Software Tool Article metrics
KEGGViewer, a BioJS component to visualize KEGG Pathways
[version 1; peer review: 2 approved]
Jose M. Villaveces, Rafael C. Jimenez, Bianca H. Habermann
Peer Reviewers Hedi Peterson and Priit Adler; Alexander Pico
PUBLISHED 13 Feb 2014
1-16 of 16 ARTICLES
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