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5,641-5,660 of 5,895 ARTICLES
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 in 
https://doi.org/10.12688/f1000research.2-217.v2
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Revised
MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data
[version 2; peer review: 3 approved]
Guillermo Barturen, Antonio Rueda, José L. Oliver, Michael Hackenberg
Peer Reviewers Michael B. Stadler; Jörn Walter; Felix Krueger
LATEST VERSION PUBLISHED 21 Feb 2014
https://doi.org/10.12688/f1000research.2-248.v2
Web Tool metrics
Revised
StatsDB: platform-agnostic storage and understanding of next generation sequencing run metrics
[version 2; peer review: 3 approved]
Ricardo H. Ramirez-Gonzalez, Richard M. Leggett, Darren Waite, Anil Thanki, Nizar Drou, Mario Caccamo, Robert Davey
Peer Reviewers Mick Watson; Cyriac Kandoth; Anuj Kumar
LATEST VERSION PUBLISHED 19 Feb 2014
https://doi.org/10.12688/f1000research.3-61.v1
Research Article metrics
Characterization of a SAM-dependent fluorinase from a latent biosynthetic pathway for fluoroacetate and 4-fluorothreonine formation in Nocardia brasiliensis
[version 1; peer review: 2 approved]
Yaya Wang, Zixin Deng, Xudong Qu
Peer Reviewers Changsheng Zhang; Cormac Murphy
PUBLISHED 19 Feb 2014
https://doi.org/10.12688/f1000research.2-187.v3
Research Article metrics
Revised
Depth-dependent mortality of reef corals following a severe bleaching event: implications for thermal refuges and population recovery
[version 3; peer review: 2 approved, 1 approved with reservations]
Tom C. L. Bridge, Andrew S Hoey, Stuart J Campbell, Efin Muttaqin, Edi Rudi, Nur Fadli, Andrew H Baird
Peer Reviewers Tyler Smith; John Rooney; Bert W. Hoeksema
LATEST VERSION PUBLISHED 19 Feb 2014
https://doi.org/10.12688/f1000research.3-56.v1
Editorial metrics NOT PEER REVIEWED
The BioJS article collection of open source components for biological data visualisation
[version 1; peer review: not peer reviewed]
Manuel Corpas
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-55.v1
Commentary metrics
BioJS: an open source standard for biological visualisation – its status in 2014
[version 1; peer review: 2 approved]
Manuel Corpas, Rafael Jimenez, Seth J Carbon, Alex García, Leyla Garcia, Tatyana Goldberg, John Gomez, Alexis Kalderimis, Suzanna E Lewis, Ian Mulvany, Aleksandra Pawlik, Francis Rowland, Gustavo Salazar, Fabian Schreiber, Ian Sillitoe, William H Spooner, Anil S. Thanki, José M Villaveces, Guy Yachdav, Henning Hermjakob
Peer Reviewers Philip E. Bourne; Reinhard Schneider
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-54.v1
Software Tool Article metrics
DNAContentViewer a BioJS component to visualise GC/AT Content
[version 1; peer review: 2 approved with reservations]
Anil S. Thanki, Shabhonam Caim, Manuel Corpas, Robert P. Davey
Peer Reviewers Dan Schwartz and Joseph O'Shea; Matúš Kalaš
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-52.v1
Web Tool metrics
Sequence, a BioJS component for visualising sequences
[version 1; peer review: 2 approved]
John Gomez, Rafael Jimenez
Peer Reviewers Christoph Gille; Jeremy Goecks
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-51.v1
Web Tool metrics
BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs
[version 1; peer review: 2 approved]
Alexis Kalderimis, Radek Stepan, Julie Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
Peer Reviewers Tom C. Freeman and Derek Wright; Lynn Fink
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-50.v1
Software Tool Article metrics
PPI layouts: BioJS components for the display of Protein-Protein Interactions
[version 1; peer review: 2 approved]
Gustavo A. Salazar, Ayton Meintjes, Nicola Mulder
Peer Reviewers Laurent Gatto; Hagen Blankenburg
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-49.v1
Web Tool metrics
treeWidget: a BioJS component to visualise phylogenetic trees
[version 1; peer review: 1 approved, 1 approved with reservations]
Fabian Schreiber
Peer Reviewers Jaime Huerta-Cepas; Stephen A. Smith
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-48.v1
Web Tool metrics
HeatMapViewer: interactive display of 2D data in biology
[version 1; peer review: 2 approved]
Guy Yachdav, Maximilian Hecht, Metsada Pasmanik-Chor, Adva Yeheskel, Burkhard Rost
Peer Reviewers Jordi Deu-Pons; Jon C. Ison
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-46.v1
Web Tool metrics
BioJS InterMineTable Component: A BioJS component for displaying data from InterMine compatible webservice endpoints
[version 1; peer review: 1 approved]
Alexis Kalderimis, Radek Stepan, Julie Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
Peer Reviewers Arnaud Ceol
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-45.v1
Web Tool metrics
BioJS InterMine List Analysis: A BioJS component for displaying graphical or statistical analysis of collections of items from InterMine endpoints
[version 1; peer review: 1 approved]
Alexis Kalderimis, Radek Stepan, Julie Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
Peer Reviewers Clemens Wrzodek
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-44.v1
Software Tool Article metrics
PsicquicGraph, a BioJS component to visualize molecular interactions from PSICQUIC servers
[version 1; peer review: 2 approved]
Jose M. Villaveces, Rafael C. Jimenez, Bianca H. Habermann
Peer Reviewers Christine Orengo; Frederic de Lamotte and Jean-François Dufayard
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.3-43.v1
Software Tool Article metrics
KEGGViewer, a BioJS component to visualize KEGG Pathways
[version 1; peer review: 2 approved]
Jose M. Villaveces, Rafael C. Jimenez, Bianca H. Habermann
Peer Reviewers Hedi Peterson and Priit Adler; Alexander Pico
PUBLISHED 13 Feb 2014
https://doi.org/10.12688/f1000research.2-242.v2
Research Article metrics
Revised
From zebrafish heart jogging genes to mouse and human orthologs: using Gene Ontology to investigate mammalian heart development.
[version 2; peer review: 2 approved]
Varsha K Khodiyar, Doug Howe, Philippa J Talmud, Ross Breckenridge, Ruth C Lovering
Peer Reviewers Vincent VanBuren; Jeroen Bakkers
LATEST VERSION PUBLISHED 10 Feb 2014
https://doi.org/10.12688/f1000research.2-227.v3
Web Tool metrics
Revised
ANGDelMut – a web-based tool for predicting and analyzing functional loss mechanisms of amyotrophic lateral sclerosis-associated angiogenin mutations
[version 3; peer review: 2 approved, 1 approved with reservations]
Aditya K Padhi, Suhas V Vasaikar, Bhyravabhotla Jayaram, James Gomes
Peer Reviewers Ammar Al-Chalabi; Rafael Najmanovich; Emanuele Buratti
LATEST VERSION PUBLISHED 10 Feb 2014
https://doi.org/10.12688/f1000research.2-244.v2
Research Article metrics
Revised
Mapping whole genome shotgun sequence and variant calling in mammalian species without their reference genomes
[version 2; peer review: 2 approved]
Ted Kalbfleisch, Michael P. Heaton
Peer Reviewers Claire Wade; María Ávila-Arcos
LATEST VERSION PUBLISHED 10 Feb 2014
https://doi.org/10.12688/f1000research.3-34.v1
Research Article metrics
Genetic and environmental determinants of insect herbivore community structure in a Betula pendula population
[version 1; peer review: 2 approved]
Tarja Silfver, Matti Rousi, Elina Oksanen, Heikki Roininen
Peer Reviewers Patrick Tobin; Judith Myers
PUBLISHED 31 Jan 2014
5,641-5,660 of 5,895 ARTICLES
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